BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027B07SP1|AL428672
(887 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1214 1729 0.0
>3x_Contig1214
Length = 6334
Score = 1729 bits (872), Expect = 0.0
Identities = 885/888 (99%), Gaps = 1/888 (0%)
Strand = Plus / Plus
Query: 1 agtcgtcgtctatattcttcgcacaaagaattaaagtttggtgttgaaggtagagctgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4484 agtcgtcgtctatattcttcgcacaaagaattaaagtttggtgttgaaggtagagctgcc 4543
Query: 61 ttgttaaagggtgttgaaactctagcggaagctgtttctgccactttgggtccaaaaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4544 ttgttaaagggtgttgaaactctagcggaagctgtttctgccactttgggtccaaaaggt 4603
Query: 121 agaaacgttttgattgagcaaccatttggcgctccaaagatcaccaaggatggtgttact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4604 agaaacgttttgattgagcaaccatttggcgctccaaagatcaccaaggatggtgttact 4663
Query: 181 gttgctagagccattactttggaagataagttcgaaaacatgggtgctaagcttttacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4664 gttgctagagccattactttggaagataagttcgaaaacatgggtgctaagcttttacaa 4723
Query: 241 gaagttgcttccaagacaaacgaagctgccggtgacggtaccacttctgccactgtctta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4724 gaagttgcttccaagacaaacgaagctgccggtgacggtaccacttctgccactgtctta 4783
Query: 301 ggtaaggccattttcactgaatccgttaagaatgttgcagctggttgtaacccaatggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4784 ggtaaggccattttcactgaatccgttaagaatgttgcagctggttgtaacccaatggat 4843
Query: 361 ttgagaagaggtactcaagctgctgtcgaaaaagtaattcaatacttgtcagagaacaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4844 ttgagaagaggtactcaagctgctgtcgaaaaagtaattcaatacttgtcagagaacaag 4903
Query: 421 aaagaaatcaccacttctgctgaaatcgctcaagtggcaactatttctgccaacggggat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4904 aaagaaatcaccacttctgctgaaatcgctcaagtggcaactatttctgccaacggggat 4963
Query: 481 gctcacgttggtaagttgttggcttcagccatggaaaaagttggtaaggaaggtgtcatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4964 gctcacgttggtaagttgttggcttcagccatggaaaaagttggtaaggaaggtgtcatc 5023
Query: 541 actatcagagagggtagaaccttggaagatgaattggaagtcactgaaggtatgagattc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5024 actatcagagagggtagaaccttggaagatgaattggaagtcactgaaggtatgagattc 5083
Query: 601 gaccgtggtttcatttctccatactttattaccgacgctaaatctggtaaggtggaattt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5084 gaccgtggtttcatttctccatactttattaccgacgctaaatctggtaaggtggaattt 5143
Query: 661 gaaaaacctttgatcttattgagtgaaaagaagatctcctcaatccaggatatcttgcct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5144 gaaaaacctttgatcttattgagtgaaaagaagatctcctcaatccaggatatcttgcct 5203
Query: 721 tctttggaattgtcaaaccaaaccagaagaccattgttgatcatcgccgaagatattgat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5204 tctttggaattgtcaaaccaaaccagaagaccattgttgatcatcgccgaagatattgat 5263
Query: 781 ggcg-acttttggctgcttgtattttgaacaagttgagaggtcaagttcaagtttgtgcc 839
|||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5264 ggcgaagctttggctgcttgtattttgaacaagttgagaggtcaagttcaagtttgtgcc 5323
Query: 840 gttaaagctccaggtttcggtgataacaggaagaacaccttgggcgat 887
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5324 gttaaagctccaggtttcggtgataacaggaagaacaccttgggcgat 5371
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7230
Number of Sequences: 1807
Number of extensions: 7230
Number of successful extensions: 67
Number of sequences better than 1.0e-20: 1
length of query: 887
length of database: 10,358,551
effective HSP length: 16
effective length of query: 871
effective length of database: 10,329,639
effective search space: 8997115569
effective search space used: 8997115569
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)